The detailed information of tRNA gene sequence


Sequence ID>WENV170011419
Genome IDAPMI01064847
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 7
End posion on genome 80
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
nnnntaggct
tRNA gene sequence 
TCTCCGTTAGTTTAGTGGTAGAATGGCAGATTCCCATTCTGTTGACCCGGGTTCGATTCC
CGGACGGGGAACTA
Downstream region at tRNA end position 
ttttttattt
Secondary structure (Cloverleaf model)
>WENV170011419	Gly	CCC
                   t      ACTA ttttttattt
                     T - A
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     G G C C C     A
        G A        A      | | | | |     G
      T     T T T G       C C G G G     C
      G     + | | +                 T T
      G     G A A T
        T A        G     TGAC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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