The detailed information of tRNA gene sequence


Sequence ID>WENV170011422
Genome IDAPMI01064944
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 599
End posion on genome 523
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gccgcccagc
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCGCCCGCGCCA
Downstream region at tRNA end position 
tgtatctctc
Secondary structure (Cloverleaf model)
>WENV170011422	Asp	GTC
                   c      GCCA tgtatctctc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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