The detailed information of tRNA gene sequence


Sequence ID>WENV170011425
Genome IDAPMI01064994
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 460
End posion on genome 384
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
cggcctcggc
tRNA gene sequence 
GTGCTGGTAGCTCAACCGGATAGAGCACTGTTCTAACGAAGCAGCGGTTGCGGGTTCGAT
TCCCGTCCGGCACGCCA
Downstream region at tRNA end position 
ggtgacgcgg
Secondary structure (Cloverleaf model)
>WENV170011425	Val	AAC
                   c      GCCA ggtgacgcgg
                     G - C
                     T - A
                     G - C
                     C - G
                     T + G
                     G - C
                     G - C          T T
                    T     T G C C C     A
      C A A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTT
                    C - G
                    T - A
                    G - C
                    T + G
                    T - A
                  C       A
                  T       G
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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