The detailed information of tRNA gene sequence


Sequence ID>WENV170011426
Genome IDAPMI01065039
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 268
End posion on genome 344
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aagggcgtgt
tRNA gene sequence 
CGGGGCGTGGCTCAGTCTGGTAGAGCACAGCGTTTGGGACGCTGGGGTCGGGGGTTCGAA
TCCCTCCGCCCCGACCA
Downstream region at tRNA end position 
tcctcaccca
Secondary structure (Cloverleaf model)
>WENV170011426	Pro	TGG
                   t      ACCA tcctcaccca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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