The detailed information of tRNA gene sequence


Sequence ID>WENV170011439
Genome IDAPMI01065670
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1095
End posion on genome 1019
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggtggtcgtt
tRNA gene sequence 
GCTGGCGTAGCTCAGTTCGGTAGAGCAGCTGATTTGTAATCAGCGGGTCGGGGGTTCGAT
TCCCTTCGCCAGCTTCA
Downstream region at tRNA end position 
tttaaaatcg
Secondary structure (Cloverleaf model)
>WENV170011439	Thr	TGT
                   t      TTCA tttaaaatcg
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T T C C C     A
      T G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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