The detailed information of tRNA gene sequence


Sequence ID>WENV170011449
Genome IDAPMI01066351
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 798
End posion on genome 887
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttttaaatt
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGGAAACTGTA
TCAAGAGTTCGAATCTCTTACTCTCCGCAA
Downstream region at tRNA end position 
taagaaattg
Secondary structure (Cloverleaf model)
>WENV170011449	Ser	GGA
                   t      GCAA taagaaattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       A A G A G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGGAAACTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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