The detailed information of tRNA gene sequence


Sequence ID>WENV170011468
Genome IDAPMI01067610
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 631
End posion on genome 720
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccatgttagc
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGTTTAAGGCACTCGCCTGGAAAGCGGGCATAGGGTTAAACCTA
TCGTGAGTTCGAATCTCATCCCCTCCGCCA
Downstream region at tRNA end position 
ttattctaaa
Secondary structure (Cloverleaf model)
>WENV170011468	Ser	GGA
                   c      GCCA ttattctaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C T C     A
      C G A        G      + | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CATAGGGTTAAACCTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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