The detailed information of tRNA gene sequence


Sequence ID>WENV170011471
Genome IDAPMI01067835
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1387
End posion on genome 1314
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
nnnnnnnntg
tRNA gene sequence 
TCCGCATTGGTCTATCTGGTTAGGATATCAGGCTCTCACCCTGATGGGCCGGGTTCAATC
CCCGGGTGCGGAACtt
Downstream region at tRNA end position 
ttttattttg
Secondary structure (Cloverleaf model)
>WENV170011471	Glu	CTC
                   g      ACtt ttttattttg
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     T + G          C T
                    T     G G C C C     A
      C T A        G      | | | | |     A
    T       T C T G       C C G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        A     TGGG
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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