The detailed information of tRNA gene sequence


Sequence ID>WENV170011478
Genome IDAPMI01068038
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2216
End posion on genome 2300
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttaaagtaa
tRNA gene sequence 
GCCCAGATGGCGGAATTGGTAGACGCGCTAGACTCAAAATCTGGTTTCCGCAAGGGAGTG
CAGGTTCGATTCCTGTTCTGGGCACtt
Downstream region at tRNA end position 
tccccgcttt
Secondary structure (Cloverleaf model)
>WENV170011478	Leu	CAA
                   a      ACtt tccccgcttt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTTCCGCAAGGGAGT
                    C - G
                    T + G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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