The detailed information of tRNA gene sequence


Sequence ID>WENV170011486
Genome IDAPMI01068948
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 188
End posion on genome 264
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gccccgatgc
tRNA gene sequence 
GGTTCCGTAGCTCAGCAGGATAGAGCAGCGGTTTCCTAAACCGAAGGTCACAGGTTCGAA
TCCTGTCGGGACCGCCA
Downstream region at tRNA end position 
ctccaggccg
Secondary structure (Cloverleaf model)
>WENV170011486	Arg	CCT
                   c      GCCA ctccaggccg
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    A       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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