The detailed information of tRNA gene sequence


Sequence ID>WENV170011534
Genome IDAPMI01072684
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1164
End posion on genome 1088
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tactttcatt
tRNA gene sequence 
CGGGGCGTAGCGAAGCCTGGTATCGCGCTACTTTTGGGAAGTAGAGAGCGTGGGTTCAAA
TCCCGCCGCCCCGACCT
Downstream region at tRNA end position 
taacaacgag
Secondary structure (Cloverleaf model)
>WENV170011534	Pro	TGG
                   t      ACCT taacaacgag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    C       A G C G       G T G G G     C
    T       | | | |                 T T
    G       T C G C
      G T A        G     AGAGC
                    C - G
                    T - A
                    A - T
                    C - G
                    T - A
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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