The detailed information of tRNA gene sequence


Sequence ID>WENV170011588
Genome IDAPMI01075299
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 549
End posion on genome 477
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tttatgtgat
tRNA gene sequence 
GCCACCTTAGCTCAACGGTAGAGCATACGCTTCGTAAGCGTGAGGTTTTGGGTTCAAATC
CCAAAGGTGGCTCat
Downstream region at tRNA end position 
tctgcaagag
Secondary structure (Cloverleaf model)
>WENV170011588	Thr	CGT
                   t      TCat tctgcaagag
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T A
                    T     A A C C C     A
        A A        A      | | | | |     A
      C     C T C G       T T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    T + G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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