The detailed information of tRNA gene sequence


Sequence ID>WENV170011599
Genome IDAPMI01076602
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3475
End posion on genome 3401
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcaccattct
tRNA gene sequence 
GGCCTCGTCGTCTACTGGTTAGGACGCCGGTCTTTCACATCGGCAGAGCGGGTTCGATTC
CCGCCGAGGCTACCA
Downstream region at tRNA end position 
gcgcgccgct
Secondary structure (Cloverleaf model)
>WENV170011599	Glu	TTC
                   t      ACCA gcgcgccgct
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C G C C C     A
      T C A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     CAGA
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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