The detailed information of tRNA gene sequence


Sequence ID>WENV170011605
Genome IDAPMI01076753
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 233
End posion on genome 311
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
accggcagga
tRNA gene sequence 
CGGGGTATAGCGCAGTTTGGTAGCGCGTCCGCTTTGGGAGCGGAGAAGGTCGTCGGTTCG
AATCCGGCTACCCCGACCA
Downstream region at tRNA end position 
actagagtgt
Secondary structure (Cloverleaf model)
>WENV170011605	Pro	TGG
                   a      ACCA actagagtgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G G C C     A
      T G A        A      | + | | |     G
    T       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     GAAGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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