The detailed information of tRNA gene sequence


Sequence ID>WENV170011611
Genome IDAPMI01076930
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1295
End posion on genome 1372
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accataatat
tRNA gene sequence 
GCCGGTAGGGCGGTAGCGGAATCGCGCTTTCCTCATAAGAAAGAAATGAAGTTGGATCGA
AGCCAACTGCCGGCACCA
Downstream region at tRNA end position 
agtttggtag
Secondary structure (Cloverleaf model)
>WENV170011611	Met	CAT
                   t      ACCA agtttggtag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          G A
                    G     C A A C C     A
      G A T        G      | | | | |     G
    C       G G C G       G T T G G     C
    G       + | | |                 A T
    G       T C G C
      A A          G     AAATGAA
                    C - G
                    T - A
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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