The detailed information of tRNA gene sequence


Sequence ID>WENV170011614
Genome IDAPMI01076930
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2308
End posion on genome 2389
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aacaactcat
tRNA gene sequence 
GCCGGGTTGGCTCAGCGGCGACAGCAACTGTTTTGTAAGCAGTGATACCACATCGGGGGT
TCGAGTCCCTCACCCGGCACCA
Downstream region at tRNA end position 
tttcaaaagg
Secondary structure (Cloverleaf model)
>WENV170011614	Thr	TGT
                   t      ACCA tttcaaaagg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       C T C G       G G G G G     C
    G         | | |                 T T
    C       C A G C
      G A          A     GATACCACATC
                    A - T
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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