The detailed information of tRNA gene sequence


Sequence ID>WENV170011645
Genome IDAPMI01079055
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 270
End posion on genome 342
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagataacaa
tRNA gene sequence 
GAGCTTATAGTTCAATTGGTAGAACACGTTGCTCATAACAACGCAGTTGTAGGTTCGAGT
CCTGCTTGGCTCAatc
Downstream region at tRNA end position 
ttttataatt
Secondary structure (Cloverleaf model)
>WENV170011645	Met	CAT
                   a      Aatc ttttataatt
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     T   T
                     A - T          T G
                    T     C G T C C     A
      T A A        A      | + | | |     G
    T       C T T G       G T A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          A     CAGTT
                    C - G
                    G - C
                    T - A
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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