The detailed information of tRNA gene sequence


Sequence ID>WENV170011646
Genome IDAPMI01079055
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1844
End posion on genome 1917
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aattaataaa
tRNA gene sequence 
GAGGACGTAGCTCAGTTGGTTAGAGTATTGGCTTGTCACGCCAAGGGTCGCGGGTTCGAC
TCCCGTCGTCCTCGttt
Downstream region at tRNA end position 
ttttgtttga
Secondary structure (Cloverleaf model)
>WENV170011646	Asp	GTC
                   a      Gttt ttttgtttga
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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