The detailed information of tRNA gene sequence


Sequence ID>WENV170011650
Genome IDAPMI01079055
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3013
End posion on genome 3100
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaataaacaa
tRNA gene sequence 
GGAAGAATGGCTGAGTGGCTTAAGGCACTGGTTTGCTAAATCAGCGTACATTTATGATGT
ACCATGGGTTCGAATCCCTTTTCTTCCGatt
Downstream region at tRNA end position 
ttcttatttc
Secondary structure (Cloverleaf model)
>WENV170011650	Ser	GCT
                   a      Gatt ttcttatttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A - T          T A
                    T     T T C C C     A
      T G A        G      |   | | |     G
    G       G T C G       A T G G G     C
    G         + | |                 T T
    C       A G G C
      T T A        A     CGTACATTTATGATGTACC
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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