The detailed information of tRNA gene sequence


Sequence ID>WENV170011670
Genome IDAPMI01080770
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1339
End posion on genome 1265
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgggcgcgac
tRNA gene sequence 
GGGCGATTAGCTCAGCGGGAGAGCACTCCCTTCACACGGGAGGGGTCGCAGGTTCAATCC
CTGCATCGCCCACCA
Downstream region at tRNA end position 
ttttttcttc
Secondary structure (Cloverleaf model)
>WENV170011670	Val	CAC
                   c      ACCA ttttttcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     C G T C C     A
        G A        A      | | | | |     A
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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