The detailed information of tRNA gene sequence


Sequence ID>WENV170011674
Genome IDAPMI01081030
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1477
End posion on genome 1552
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaggaccttt
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGTTAACATATCCGCCTGTCACGTGGAAGATCGCGGGTTCGAAA
CCCGTCAGCTCCGCCT
Downstream region at tRNA end position 
tggccacatt
Secondary structure (Cloverleaf model)
>WENV170011674	Asp	GTC
                   t      GCCT tggccacatt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          A A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          A     AGATC
                    T - A
                    C - G
                    C - G
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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