The detailed information of tRNA gene sequence


Sequence ID>WENV170011686
Genome IDAPMI01082444
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1475
End posion on genome 1549
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gacggcaagt
tRNA gene sequence 
GCCTCCATAGTTAAATGGATATAACACGCCCCTCCTAAGGGCGAATTGGTGGTTCGATTC
CACCTGGGGGTACCA
Downstream region at tRNA end position 
aattcacagg
Secondary structure (Cloverleaf model)
>WENV170011686	Arg	CCT
                   t      ACCA aattcacagg
                     G + T
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     A - T          T T
                    T     C C A C C     A
      T A A        A      | | | | |     G
    G       A T T G       G G T G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     AATT
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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