The detailed information of tRNA gene sequence


Sequence ID>WENV170011689
Genome IDAPMI01082456
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4401
End posion on genome 4315
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tcaccatagc
tRNA gene sequence 
GCTACGTTGCCCGAGAGGTTGAAGGGAACGGATTTGTAATCCGTCGACGAAAGTCCATCG
CAGGTTCGAATCCTGTGCGTAGCACCA
Downstream region at tRNA end position 
ccaggagata
Secondary structure (Cloverleaf model)
>WENV170011689	Thr	TGT
                   c      ACCA ccaggagata
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C
                     T + G          T A
                    T     T G T C C     A
      A G A        G      + | | | |     G
    G       G C C C       G C A G G     C
    G         | | |                 T T
    T       A G G G
      T G A        A     CGACGAAAGTCCATC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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