The detailed information of tRNA gene sequence


Sequence ID>WENV170011690
Genome IDAPMI01082456
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2554
End posion on genome 2465
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
cgcgtctcaa
tRNA gene sequence 
GGCCCTGTAGTTTAATGGTAAAACACCGCCCTTATAAGGCGTACTCCAGATTAGAGGGTA
ATGCAGGTTCGAATCCTGCCAGGGCTACCA
Downstream region at tRNA end position 
tcacatgggc
Secondary structure (Cloverleaf model)
>WENV170011690	Ile	TAT
                   a      ACCA tcacatgggc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G T C C     A
        A A        A      | | | | |     G
      T     T T T G       G C A G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ACTCCAGATTAGAGGGTAAT
                    C   T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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