The detailed information of tRNA gene sequence


Sequence ID>WENV170011698
Genome IDAPMI01083117
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1446
End posion on genome 1518
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
gtacagttac
tRNA gene sequence 
GCCTGTATAGCTTAGTTGGTAGAGCACTTGCCTAGTAAGCAAGAGGTCTCCGGTTCGACT
CCGGATACAGGCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170011698	Thr	AGT
                   c      Tnnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A
                     A - T          T C
                    T     A G G C C     A
      T G A        A      | | | | |     G
    T       T T C G       T C C G G     C
    G       + | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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