The detailed information of tRNA gene sequence


Sequence ID>WENV170011706
Genome IDAPMI01084023
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1582
End posion on genome 1655
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcgaaaaac
tRNA gene sequence 
ACCTATTTAGCTCAGTTGGTTAGAGTATCCGCCTCATATGCGGAATGCCACTGGTTCAAT
CCCAGTAGTAGGTAata
Downstream region at tRNA end position 
ataaagcaat
Secondary structure (Cloverleaf model)
>WENV170011706	Met	CAT
                   c      Aata ataaagcaat
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T
                     T + G
                     T - A          C T
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     ATGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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