The detailed information of tRNA gene sequence


Sequence ID>WENV170011729
Genome IDAPMI01086150
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5343
End posion on genome 5433
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgtccacgc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACTAAAGCGCCCGCCTGCTAAGTGGGTAGGGGATAATATCTC
CTCTCGGGTTCGAATCCCGATCTCTCCGCCA
Downstream region at tRNA end position 
cctggcttat
Secondary structure (Cloverleaf model)
>WENV170011729	Ser	GCT
                   c      GCCA cctggcttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       T C G G G     C
    G         | | |                 T T
    A       A A G C
      C T A        G     TAGGGGATAATATCTCCTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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