The detailed information of tRNA gene sequence


Sequence ID>WENV170011737
Genome IDAPMI01086708
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1265
End posion on genome 1178
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcgccctgt
tRNA gene sequence 
GGAGGTGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGGCCCGAAAGGGTCC
GTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
gaagcccagc
Secondary structure (Cloverleaf model)
>WENV170011737	Ser	TGA
                   t      GCCA gaagcccagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGGCCCGAAAGGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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