The detailed information of tRNA gene sequence


Sequence ID>WENV170011760
Genome IDAPMI01089010
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 598
End posion on genome 672
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
caagccagat
tRNA gene sequence 
GCCGGCATAGCACAGCGGTAGTGCAGCGGTTTTGTAAACCGAAGGTCGGGAGTTCGATCC
TCTCTGCCGGCACCA
Downstream region at tRNA end position 
gtcccatcgg
Secondary structure (Cloverleaf model)
>WENV170011760	Thr	TGT
                   t      ACCA gtcccatcgg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     C T C T C     A
        G A        A      | + | | |     G
      C     C A C G       G G G A G     C
      G     | | | |                 T T
      G     G T G C
        T A        A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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