The detailed information of tRNA gene sequence


Sequence ID>WENV170011786
Genome IDAPMI01090425
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1031
End posion on genome 956
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttacagcacc
tRNA gene sequence 
GGAACGTTAGCTCAGTTGGTTCAGAGCATTACTTTGACAGAGTAGGGGTCACTGGTTCGA
GTCCAGTACGTTCCACtt
Downstream region at tRNA end position 
ttttcttcgc
Secondary structure (Cloverleaf model)
>WENV170011786	Val	GAC
                   c      ACtt ttttcttcgc
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C
                     T - A          T G
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C G       A C T G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    T - A
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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