The detailed information of tRNA gene sequence


Sequence ID>WENV170011800
Genome IDAPMI01092041
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 997
End posion on genome 1085
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcgcccac
tRNA gene sequence 
GGAGGATTCGCATAGCGGCCTAGTGCGCACGATTGGAAATCGTGTTGGGCTAAACACCCT
CAGGGGTTCAAATCCCCTATCCTCCGCCA
Downstream region at tRNA end position 
ttgcggaccg
Secondary structure (Cloverleaf model)
>WENV170011800	Ser	GGA
                   c      GCCA ttgcggaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      C G A        C      | | | | |     A
    G       T A C G       A G G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGCTAAACACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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