The detailed information of tRNA gene sequence


Sequence ID>WENV170011803
Genome IDAPMI01092560
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2337
End posion on genome 2260
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtgaacacag
tRNA gene sequence 
GGGCCTATAGCTCAGTCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGA
ATCCACCTAGGCCCACCA
Downstream region at tRNA end position 
gtttcgcatt
Secondary structure (Cloverleaf model)
>WENV170011803	Ile	GAT
                   g      ACCA gtttcgcatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     C C A C C     A
    C T G A        A      | | | | |     G
  T         C T C G       G G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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