The detailed information of tRNA gene sequence


Sequence ID>WENV170011818
Genome IDAPMI01094042
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1151
End posion on genome 1240
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccagagtac
tRNA gene sequence 
GGAAGGTTGCCGGAGCGGCTGATCGGCACGCATTCGAAATGCGATGGTTGCGCAAGCGAC
ACGAAGGTTCGAATCCTTCACCTTCCGCCA
Downstream region at tRNA end position 
gttttctcgc
Secondary structure (Cloverleaf model)
>WENV170011818	Ser	CGA
                   c      GCCA gttttctcgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C T T C C     A
      C G A        G      | | | | |     G
    G       G G C C       G A A G G     C
    G       + | | |                 T T
    C       T C G G
      T G A        C     TGGTTGCGCAAGCGACAC
                    A   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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