The detailed information of tRNA gene sequence


Sequence ID>WENV170011820
Genome IDAPMI01094042
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1409
End posion on genome 1506
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccagaatcct
tRNA gene sequence 
GGAGATGTGGCCGAGAGGCTGATGGCGCTGTCCTGCTAAGACAGAGAACGACGGCAATCA
CCGTGGTTCCGCTGGTTCGAATCCAGCCATCTCCGCCA
Downstream region at tRNA end position 
gaatggcgcg
Secondary structure (Cloverleaf model)
>WENV170011820	Ser	GCT
                   t      GCCA gaatggcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G A C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    C       T G G C
      T G A        G     AGAACGACGGCAATCACCGTGGTTCC
                    C - G
                    T - A
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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