The detailed information of tRNA gene sequence


Sequence ID>WENV170011823
Genome IDAPMI01094042
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2103
End posion on genome 2177
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagtgacacc
tRNA gene sequence 
GGTGACGTAGCTCAGTGGAAGAGCGTTCGGCTCATAACCGAAGGGTCGTTGGATCGTTGC
CAACCATCACCACCA
Downstream region at tRNA end position 
attcatcgcc
Secondary structure (Cloverleaf model)
>WENV170011823	Met	CAT
                   c      ACCA attcatcgcc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C   A
                     G - C          G T
                    T     C A A C C     T
        G A        A      | | | | |     G
      T     C T C G       G T T G G     C
      G     | | | |                 A T
      G     G A G C
        A A        G     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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