The detailed information of tRNA gene sequence


Sequence ID>WENV170011828
Genome IDAPMI01094500
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4963
End posion on genome 5036
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acatctactc
tRNA gene sequence 
GGTGGGGTAGAGCAGTCTGGAAGCTCGTGAGGCTCATAATCTTAAGGTCATAGGTTCAAA
TCCTATTCCCACCCatt
Downstream region at tRNA end position 
tttgttcttt
Secondary structure (Cloverleaf model)
>WENV170011828	Met	CAT
                   c      Catt tttgttcttt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T A T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T - A
                    G + T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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