The detailed information of tRNA gene sequence


Sequence ID>WENV170011841
Genome IDAPMI01095848
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 99
End posion on genome 174
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taatttttat
tRNA gene sequence 
GGGGCACTAGCTCATTTGGTAGAGCGCTTCCATGGCATGGAAGAGGCGAGGAGTTCAAGT
CTCCTGTGCTCCACCA
Downstream region at tRNA end position 
tgaaaaaata
Secondary structure (Cloverleaf model)
>WENV170011841	Ala	GGC
                   t      ACCA tgaaaaaata
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     C - G          T G
                    T     T C C T C     A
      T T A        A      | | | | |     A
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCG
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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