The detailed information of tRNA gene sequence


Sequence ID>WENV170011842
Genome IDAPMI01095848
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 487
End posion on genome 564
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aatatcgctt
tRNA gene sequence 
GGGGAATTAGCTCAGCCCGGCTAGAGCGCACGATTCACATTCGTGAGGTCACAGGTTCGA
TCCCTGTATTCCCCACCA
Downstream region at tRNA end position 
gataaagaag
Secondary structure (Cloverleaf model)
>WENV170011842	Val	CAC
                   t      ACCA gataaagaag
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A          C T
                    T     T G T C C     A
    C C G A        A      | | | | |     G
  C         C T C G       A C A G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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