The detailed information of tRNA gene sequence


Sequence ID>WENV170011857
Genome IDAPMI01097244
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 210
End posion on genome 121
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaaatacaa
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTTGAAGGAGCTACCCTGGAAAGGTAGTGTACGGGTAACTGTA
TCGAGTGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
tagaaaagcg
Secondary structure (Cloverleaf model)
>WENV170011857	Ser	GGA
                   a      GCAA tagaaaagcg
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | |   |     G
    G       G C C T       G A G T G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGTACGGGTAACTGTATC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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