The detailed information of tRNA gene sequence


Sequence ID>WENV170011861
Genome IDAPMI01097374
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 972
End posion on genome 887
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcggagttcg
tRNA gene sequence 
GGCGAGATCGCATAGTGGACTAGTGCAGCCGCCTTGAAAGCGGCCGAGCGGAAACGCTCC
GTGGGTTCGAATCCCACTCTCGCCGCgt
Downstream region at tRNA end position 
gagtgtcgcc
Secondary structure (Cloverleaf model)
>WENV170011861	Ser	TGA
                   g      GCgt gagtgtcgcc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      C T A        A     CGAGCGGAAACGCTCC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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