The detailed information of tRNA gene sequence


Sequence ID>WENV170011864
Genome IDAPMI01097676
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1522
End posion on genome 1448
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcttgtttgt
tRNA gene sequence 
GGCTCCTTCGTCTATCGGTTAGGACATCTGATTTTCAATCAGGAAAGACGGGTTCGATTC
CCGTAGGAGCTGCCA
Downstream region at tRNA end position 
ctttttccca
Secondary structure (Cloverleaf model)
>WENV170011864	Glu	TTC
                   t      GCCA ctttttccca
                     G + T
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    T + G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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