The detailed information of tRNA gene sequence


Sequence ID>WENV170011873
Genome IDAPMI01098226
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 136
End posion on genome 61
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcgaaacgc
tRNA gene sequence 
AGGGCAGTAGCTCCAACGGCAGAGCATCGGACTCCAAATCCGAGGGTTGTGGGTTCGAAT
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
tatttctggt
Secondary structure (Cloverleaf model)
>WENV170011873	Trp	CCA
                   c      GCCA tatttctggt
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A C        A      |   | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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