The detailed information of tRNA gene sequence


Sequence ID>WENV170011904
Genome IDAPMI01100840
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1116
End posion on genome 1191
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccattatat
tRNA gene sequence 
CGCGGGATAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCGAGT
CCTGTTCCCGCTACAA
Downstream region at tRNA end position 
agtaaaagtg
Secondary structure (Cloverleaf model)
>WENV170011904	Met	CAT
                   t      ACAA agtaaaagtg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C G A G       A C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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