The detailed information of tRNA gene sequence


Sequence ID>WENV170011919
Genome IDAPMI01102947
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 853
End posion on genome 928
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggggcgaatt
tRNA gene sequence 
GCCCTTGTAGCTCAGCTGGTAGAGCAGCGGTTTTGTAAACCGAAGGTCGCGGGTTCGATT
CCTGCCGGGGGCACCA
Downstream region at tRNA end position 
tctctcaaac
Secondary structure (Cloverleaf model)
>WENV170011919	Thr	TGT
                   t      ACCA tctctcaaac
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          T T
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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