The detailed information of tRNA gene sequence


Sequence ID>WENV170011946
Genome IDAPMI01105935
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 236
End posion on genome 327
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccttcgct
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAATCGTCGTACTCTGTAAGGGG
TACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gcaccccgtc
Secondary structure (Cloverleaf model)
>WENV170011946	Ser	GCT
                   t      GCCA gcaccccgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACTCTGTAAGGGGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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