The detailed information of tRNA gene sequence


Sequence ID>WENV170011949
Genome IDAPMI01105951
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 888
End posion on genome 813
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caaaccattc
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAACGGTTCGATC
CCGTTAGGCTCCACCA
Downstream region at tRNA end position 
tttggtttgg
Secondary structure (Cloverleaf model)
>WENV170011949	Ala	TGC
                   c      ACCA tttggtttgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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