The detailed information of tRNA gene sequence


Sequence ID>WENV170011956
Genome IDAPMI01106552
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1639
End posion on genome 1552
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatcacaaaa
tRNA gene sequence 
GGAGAGTAGGCAAATAATGGTTTGTTGCGGCTTACTGCTAATGAGTTCTACGACAGTAGT
GAAGGTTCGATTCCTTTGCTCTCCGCAA
Downstream region at tRNA end position 
aaggtctatt
Secondary structure (Cloverleaf model)
>WENV170011956	Ser	GCT
                   a      GCAA aaggtctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T T
                    A     T T T C C     A
    A A T A        G      + | | | |     G
  T         A A C G       G A A G G     C
  G         | | | |                 T T
  G         T T G C
    T T T G        G     TCTACGACAGTAGT
                    G + T
                    C - G
                    T - A
                    T + G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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