The detailed information of tRNA gene sequence


Sequence ID>WENV170011988
Genome IDAPMI01108470
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 268
End posion on genome 357
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggctgggtgg
tRNA gene sequence 
GGAGGCGTCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGTGGGTTGGGATTAACCTCCC
TCGCGGGTTCAAATCCCGCCGCCTCCGCCC
Downstream region at tRNA end position 
gcgcatcgac
Secondary structure (Cloverleaf model)
>WENV170011988	Ser	GCT
                   g      GCCC gcgcatcgac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGATTAACCTCCCTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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