The detailed information of tRNA gene sequence


Sequence ID>WENV170011999
Genome IDAPMI01109224
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 527
End posion on genome 436
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgcgccgtgc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACTCGTTTTGTAAATGAGCAGACCTAGAAATGGG
TCTCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
atttcactcc
Secondary structure (Cloverleaf model)
>WENV170011999	Thr	TGT
                   c      GCCA atttcactcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CAGACCTAGAAATGGGTCTC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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