The detailed information of tRNA gene sequence


Sequence ID>WENV170012021
Genome IDAPMI01112323
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 296
End posion on genome 371
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gtcaaactct
tRNA gene sequence 
GGCCCCGTAGTTCAGAGGATAGAACAAGCGTTTCCTAAACGCTGTGTCGGGGGTTCAATT
CCCTCCGGGGCCACCA
Downstream region at tRNA end position 
aaatataata
Secondary structure (Cloverleaf model)
>WENV170012021	Arg	CCT
                   t      ACCA aaatataata
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C T C C C     A
      A G A        A      | + | | |     A
    G       C T T G       G G G G G     C
    G       | | | |                 T T
    A       G A A C
      T A          A     GTGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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